Welcome to Julian Damashek’s Aquatic Microbial ‘Omics, Ecology, and Biogeochemistry in the Anthropocene (AMOEBA) lab at Hamilton College!

We study microbial communities in aquatic ecosystems and how these microbes affect vital ecosystem processes, including all sorts of questions related to microbes, nutrients, and/or water. Out primary interests are nitrogen cycling, archaea, and water quality. Scroll down to the News section to see what is currently going on in the lab!

To study these, we use tools from microbial ecology, biogeochemistry, and bioinformatics. This array of interdisciplinary methods allows our questions to span a wide range of scales, from genes to cells to microbial populations to entire ecosystems. And we always try to get out to the field to sample from boats and docks as much as possible!

If you are a student interested in ecology, microbiology, limnology, oceanography, genomics, or computational biology - or anything else related to microbes, nutrients, or water - read through the information about our projects, then go look at some of our recent publications. If you are still interested, you are encouraged to contact Dr. Damashek at any time. We are always looking for more help on current projects and are excited to talk about potential future projects or collaborations, even if they are different from what we work on now.

Please click through the links at the top of the page to learn more about who we are, what we do, and what we have published.

February 2024: New semester, new faces!

All four students from the lab last semester are now abroad, but we were joined by Oliver, Zach, Albert, Reilan, Lil, Paige, and Rasikh, who will be working on a multitude of projects including N biogeochemistry, fecal source tracking, comparative metagenomics, and flow cytometry.

RECENT LAB NEWS

Nov. 2023: More antimicrobial resistance!

Julian is a co-author on a new publication detailing the effects of wastewater treatment plants on antibiotic resistance in streams. This is another paper from a large collaboration with the USDA, the University of Georgia, the EPA, and the University of North Georgia.

Congrats to Gabi Cho for pulling the analyses and paper together!

Emply lab glassware organized on a shelf, with sunlight shining from the back

July 2023: We moved! After 4 great years at Utica University, the lab moved to the Biology Department at Hamilton College.

View out a window during sunrise. The sky is orange at the horizon and gradually changes to blue. The sun is just starting to peek out from beside a building.